Publications

Matthew G. Hanna, Patricia Raciti, Ran A. Godrich, Adam Casson, Julian Viret, Donghun Lee, Matthew C. H. Lee, Alican Bozkurt, Philippe Mathieu, Brandon Rothrock, Thomas J. Fuchs. Abstract PD6-03: Clinical-Grade Detection of Breast Cancer in Biopsies and Excisions Using Machine Learning. In Cancer Res, 2021.

Alican Bozkurt

Equal contribution

, Babak Esmaeili

Equal contribution

, Jean-Baptiste Tristan, Jennifer Dy, Dana H. Brooks, Jan-Willem van de Meent. Rate-Regularization and Generalization in VAEs. In AISTATS, 2021.

Kivanc Kose, Alican Bozkurt, Christi Alessi-Fox, Melissa Gill, Dana H. Brooks, Jennifer G. Dy, Milind Rajadhyaksha. Detection of the DEJ and Segmentation of Its Morphological Patterns in RCM Images of Melanocytic Skin Lesions. In Microscopy Histopathology and Analytics, 2020.

Alican Bozkurt. Deep Representation Learning for Complex Medical Images. Ph.D. Thesis, 2020.

Kivanc Kose

Equal contribution

, Alican Bozkurt

Equal contribution

, Christi Alessi-Fox, Melissa Gill, Caterina Longo, Giovanni Pellacani, Jennifer Dy, Dana H. Brooks, Milind Rajadhyaksha. Segmentation of Cellular Patterns in Confocal Images of Melanocytic Lesions in vivo via a Multiscale Encoder-Decoder Network (MED-Net). In MedIA, 2020.

Kivanc Kose, Alican Bozkurt, Christi Alessi-Fox, Dana H. Brooks, Jennifer Dy, Milind Rajadhyaksha, Melissa Gill. Utilizing Machine Learning for Image Quality Assessment for Reflectance Confocal Microscopy. In JID, 2019.

Kivanc Kose, Alican Bozkurt, Jennifer Dy, Dana Brooks, Milind Rajadhyaksha. Facilitating the Adoption of Reflectance Confocal Microscopy (RCM) in Clinical Cancer Care Practice with Machine Learning. In FAC Symposium, 2019.

Babak Esmaeili, Hao Wu, Sarthak Jain, Alican Bozkurt, N. Siddarth, Brooks Paige, Jennifer Dy, Dana H. Brooks, Jan-Willem van de Meent. Structured Disentagled Representations. In AISTATS, 2019.

Alican Bozkurt, Babak Esmaeili, Jennifer Dy, Dana H. Brooks, Jan-Willem van de Meent. Can VAEs generate novel examples?. In CRACT, 2018.

Qiong Wu, Alounso Boueiz, Alican Bozkurt, Afsaneh Masoomi, Ao Wang, Dawn L. DeMeo, Scott T. Weiss, Fei Wang, Dana H. Brooks, Jennifer G. Dy. Deep Learning Methods for Predicting Disease Status Using Genomic Data. In J Biometrics Biostat, 2018.